I have been continuing the port of Magicosm to Xith3D and the implementation of the necessary features in Xith3D. I got the nested skydomes working tonight. Thats 5 nested domes with alpha blending and moving clouds. It is rendering at 500 fps in fullscreen 1200x1000, and I am not even using vertex arrays yet for triangle strips.
All I can say is that I am heartened regarding the performance of Java and JOGL.